Working with Mootools 1.3
From Joomla! Documentation
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Joomla 1.6.0 includes Mootools Core 1.3 and Mootools More 1.3.0.1 including all it's modules.
How to use Mootools[edit]
If your extension uses Mootools you can use the following code to include the framework in Joomla's output.
Mootools Core:
JHtml::_('behavior.framework');
Mootools Core and Mootools More:
JHtml::_('behavior.framework', true);
Differences to Mootools 1.1/1.2[edit]
The most important difference between Mootools 1.3 and older versions is, that the $() function is deprecated. Instead document.id() should be used.
More information[edit]
You can find more information, examples and Mootools plug-ins on the Mootools Homepage.